Author(s):
Gomes, Sibylle M. ; Bodner, Martin ; Souto, Luís ; Zimmermann, Bettina ; Huber, Gabriela ; Strobl, Christina ; Röck, Alexander W. ; Achilli, Alessandro ; Olivieri, Anna ; Torroni, Antonio ; Corte Real, Francisco ; Parson, Walther
Date: 2015
Persistent ID: https://hdl.handle.net/10316/109079
Origin: Estudo Geral - Universidade de Coimbra
Subject(s): East Timor (Timor-Leste); Island Southeast Asia; Mitochondrial DNA; mtDNA haplogroup P; Human migration; First settlers; Population genetics; Forensic mtDNA analysis; Next generation sequencing; Ion Torrent PGM; Asian People; Australia; Chromosomes, Human, Y; DNA, Mitochondrial; Female; Geography; Haplotypes; History, Ancient; Human Migration; Humans; Male; Molecular Sequence Data; Timor-Leste; Phylogeny
Description
Background: Distinct, partly competing, “waves” have been proposed to explain human migration in(to) today’s Island Southeast Asia and Australia based on genetic (and other) evidence. The paucity of high quality and high resolution data has impeded insights so far. In this study, one of the first in a forensic environment, we used the Ion Torrent Personal Genome Machine (PGM) for generating complete mitogenome sequences via stand-alone massively parallel sequencing and describe a standard data validation practice. Results: In this first representative investigation on the mitochondrial DNA (mtDNA) variation of East Timor (Timor-Leste) population including >300 individuals, we put special emphasis on the reconstruction of the initial settlement, in particular on the previously poorly resolved haplogroup P1, an indigenous lineage of the Southwest Pacific region. Our results suggest a colonization of southern Sahul (Australia) >37 kya, limited subsequent exchange, and a parallel incubation of initial settlers in northern Sahul (New Guinea) followed by westward migrations <28 kya. Conclusions: The temporal proximity and possible coincidence of these latter dispersals, which encompassed autochthonous haplogroups, with the postulated “later” events of (South) East Asian origin pinpoints a highly dynamic migratory phase.
