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Dengue virus surveillance: Detection of DENV-4 in the city of Sao Jose do Rio Preto, SP, Brazil


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Made available in DSpace on 2018-11-26T15:37:31Z (GMT). No. of bitstreams: 0 Previous issue date: 2016-12-01

Pronex

INCT-Dengue

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Dengue viruses are the most common arbovirus infection worldwide and are caused by four distinct serotypes of the dengue virus (DENV). In the present study, we assessed DENV transmission in Sao Jose do Rio Preto (SJRP) from 2010 to 2014. We analyzed blood samples from febrile patients who were attended at health care centers in SJRP. DENV detection was performed using multiplex RT-PCR, using flavivirus generic primers, based on the genes of the non-structural protein (NS5), followed by nestedPCR assay with species-specific primers. We analyzed 1549 samples, of which 1389 were positive for NS1 by rapid test. One thousand and eight-seven samples (78%) were confirmed as positive by multiplex RTPCR: DENV-4, 48.5% (528/1087); DENV-1, 41.5% (449/1087); DENV-2, 9.5% (104/1087); and co-infection (5 DENV-1/DENV-4, 1 DENV-1/DENV-2), 0.5% (6/1087). Phylogenetic analysis of the DENV-4 grouped the isolates identified in this study with the American genotype and the showed a relationship between isolates from SJRP and isolates from the northern region of South America. Taken together, our data shows the detection and emergence of new dengue genotype in a new region and reiterate the importance of surveillance programs to detect and trace the evolution of DENV. (C) 2016 Elsevier B.V. All rights reserved.

Fac Med Sao Jose do Rio Preto FAMERP, Sao Jose Do Rio Preto, SP, Brazil

Univ Estadual Paulista, Inst Biociencias Botucatu, Lab Virol, Botucatu, SP, Brazil

Dept Vigilancia Saude, Prefeitura Sao Jose do Rio Preto, Sao Jose Do Rio Preto, SP, Brazil

Univ Fed Minas Gerais, Dept Microbiol, Belo Horizonte, MG, Brazil

Univ Fed Mato Grosso, Inst Ciencias Saude, Sinop, MT, Brazil

Univ Texas Med Branch, Ctr Biodefense & Emerging Infect Dis, Ctr Trop Dis, Inst Human Infect & Immun, Galveston, TX 77555 USA

Univ Texas Med Branch, Dept Pathol, Galveston, TX 77555 USA

Univ Estadual Paulista, Inst Biociencias Botucatu, Lab Virol, Botucatu, SP, Brazil

Document Type Journal article
Language English
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