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Friends with benefits: An inside look of periodontal microbes’ interactions usi...

Esteves, GM; Pereira, JA; Azevedo, NF; Azevedo, AS; Mendes, L

Fluorescence in situ hybridization (FISH) has proven to be particularly useful to describe the microbial composition and spatial organization of mixed microbial infections, as it happens in periodontitis. This scoping review aims to identify and map all the documented interactions between microbes in periodontal pockets by the FISH technique. Three electronic sources of evidence were consulted in search of suit...


Increased intraspecies diversity in Escherichia coli biofilms promotes cellular...

Azevedo, AS; Gerola, GP; Baptista, J; Almeida, C; Peres, J; Mergulhão, FJ; Azevedo, NF

Intraspecies diversity in biofilm communities is associated with enhanced survival and growth of the individual biofilm populations. Studies on the subject are scarce, namely, when more than three strains are present. Hence, in this study, the influence of intraspecies diversity in biofilm populations composed of up to six different Escherichia coli strains isolated from urine was evaluated in conditions mimick...


Minimum information guideline for spectrophotometric and fluorometric methods t...

Jontana Allkja; Azevedo, NF; Thomas Bjarnsholt; Tom Coenye; Paul Cos; Adyary Fallarero; Joe J. Harrison; Susana P. Lopes; Antonio Oliver

The lack of reproducibility of published studies is one of the major issues facing the scientific community, and the field of biofilm microbiology has been no exception. One effective strategy against this multifaceted problem is the use of minimum information guidelines. This strategy provides a guide for authors and reviewers on the necessary information that a manuscript should include for the experiments in...


Eco-friendly non-biocide-release coatings for marine biofouling prevention

E. R. Silva; O. Ferreira; P. A. Ramalho; Azevedo, NF; R. Bayón; A. Igartua; J. C. Bordado; M. J. Calhorda

Environmental concerns have been changing the way of looking for solutions to problems. The hydrosphere, together with its biosphere, has been feeling the impact of many pollutants, used for instance in the marine industry for economic reasons or lack of knowledge of their effects. In particular biocides, applied as coatings in paints, are released into the waters becoming toxic and persistent extending their a...


Nanomaterials and molecular transporters to overcome the bacterial envelope bar...

RS Santos; Figueiredo C; Azevedo, NF; Braeckmans, K; De Smedt, SC

With the dramatic consequences of bacterial resistance to antibiotics, nanomaterials and molecular transporters have started to be investigated as alternative antibacterials or anti-infective carrier systems to improve the internalization of bactericidal drugs. However, the capability of nanomaterials/molecular transporters to overcome the bacterial cell envelope is poorly understood. It is critical to consider...


It is all about location: how to pinpoint microorganisms and their functions in...

Costa, AM; Filipe Mergulhão; Briandet, R; Azevedo, NF

Multispecies biofilms represent the dominant mode of life for the vast majority of microorganisms. Bacterial spatial localization in such biostructures governs ecological interactions between different populations and triggers the overall community functions. Here, we discuss the pros and cons of fluorescence-based techniques used to decipher bacterial species patterns in biofilms at single cell level, includin...


Applications of optical DNA mapping in microbiology

Bogas, D; Nyberg, L; Pacheco, R; Azevedo, NF; Beech, JP; Gomila, M; Lalucat, J; Manaia, CM; Olga C Nunes; Tegenfeldt, JO; Westerlund, F

Optical mapping (OM) has been used in microbiology for the past 20 years, initially as a technique to facilitate DNA sequence-based studies; however, with decreases in DNA sequencing costs and increases in sequence output from automated sequencing platforms, OM has grown into an important auxiliary tool for genome assembly and comparison. Currently, there are a number of new and exciting applications for OM in ...


Nucleic Acid Mimics (NAMs) delivery into live bacteria mediated by nanovehicles

Moreira, L.; Guimarães, N.; Joana A Loureiro; Maria do Carmo Pereira; Azevedo, NF


Morphological transition of Helicobacter pylori adapted to water

Fernandes, RM; Silva, H; Ricardo Jorge Dinis Oliveira; Almeida, C; Azevedo, NF; Vieira, MJ

Aim: This study aims to investigate the morphological transition of Helicobacter pylori during adaptation to water. Materials & methods: Different strains were adapted to water. Changes regarding cultivability and cellular morphology were recorded. Expression of 11 genes involved in H. pylori morphological changes was evaluated by real-time PCR. Results: H. pylori presented increased cultivability in water afte...



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