2 documents found, page 1 of 1
Shotgun metagenomic investigation of foodborne pathogens and antimicrobial resi...
Indio, Valentina; Olivieri, Chiara; Lucchi, Alex; Savini, Federica; Gonzales-Barron, Ursula; Skandamis, Panagiotis; Achemchem, Fouad; Manfreda, GerardoIn this pilot study, we compared the metagenomic profiles of different types of artisanal fermented meat products collected in Italy, Greece, Portugal, and Morocco to investigate their taxonomic profile, also in relation to the presence of foodborne pathogens and antimicrobial resistance genes. In addition, technical replicates of the same biological sample were tested to estimate the reproducibility of shotgun...
Resistome and virulome diversity of foodborne pathogens isolated from artisanal...
Pasquali, Frédérique; Gambi, Lucia; Cesare, Alessandra; Crippa, Cecilia; Cadavez, Vasco; Gonzales-Barron, Ursula; Valero, Antonio; Achemchem, FouadThe aim of the present study was to investigate the resistome and virulome diversity of 43 isolates of Listeria monocytogenes, Salmonella enterica and S. aureus collected from artisanal fermented meat and dairy products and their production environments in Portugal, Spain, Italy and Morocco. After DNA extraction, genomes were sequenced, and de novo assembled. Genetic relationships among genomes were investigate...