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How genomics can help biodiversity conservation

Theissinger, Kathrin; Fernandes, Carlos; Formenti, Giulio; Bista, Iliana; Berg, Paul R.; Bleidorn, Christoph; Bombarely, Aureliano; Crottini, Angelica

ABSTRACT: The availability of public genomic resources can greatly assist biodiversity assessment, conservation, and restoration efforts by providing evidence for scientifically informed management decisions. Here we survey the main approaches and applications in biodiversity and conservation genomics, considering practical factors, such as cost, time, prerequisite skills, and current shortcomings of applicatio...


How genomics can help biodiversity conservation

Theissinger, Kathrin; Fernandes, C; Formenti, Giulio; Bista, Iliana; Berg, Paul R.; Bleidorn, Christoph; Bombarely, Aureliano; Crottini, Angelica

The availability of public genomic resources can greatly assist biodiversity assessment, conservation, and restoration efforts by providing evidence for scientifically informed management decisions. Here we survey the main approaches and applications in biodiversity and conservation genomics, considering practical factors, such as cost, time, prerequisite skills, and current shortcomings of applications. Most a...


The era of reference genomes in conservation genomics

Formenti, Giulio; Theissinger, Kathrin; Fernandes, Carlos; Bista, Iliana; Bombarely, Aureliano; Bleidorn, Christoph; Ciofi, Claudio; Crottini, Angelica

Progress in genome sequencing now enables the large-scale generation of reference genomes. Various international initiatives aim to generate reference genomes representing global biodiversity. These genomes provide unique insights into genomic diversity and architecture, thereby enabling comprehensive analyses of population and functional genomics, and are expected to revolutionize conservation genomics.


The era of reference genomes in conservation genomics

Formenti, Giulio; Theissinger, Kathrin; Fernandes, C; Bista, Iliana; Bombarely, Aureliano; Bleidorn, Christoph; Ciofi, Claudio; Crottini, Angelica


Geo-climatic changes and apomixis as major drivers of diversification in the Me...

Koutroumpa, Konstantina; Warren, Ben H.; Theodoridis, Spyros; Coiro, Mario; Romeiras, Maria M.; Jiménez, Aires; Conti, Elena

The Mediterranean realm, comprising the Mediterranean and Macaronesian regions, has long been recognized as one of the world’s biodiversity hotspots, owing to its remarkable species richness and endemism. Several hypotheses on biotic and abiotic drivers of species diversification in the region have been often proposed but rarely tested in an explicit phylogenetic framework. Here, we investigate the impact of bo...


Geo-Climatic Changes and Apomixis as Major Drivers of Diversification in the Me...

Koutroumpa, Konstantina; Warren, Ben H.; Theodoridis, Spyros; Coiro, Mario; Romeiras, Maria M.; Jiménez, Ares; Conti, Elena

The Mediterranean realm, comprising the Mediterranean and Macaronesian regions, has long been recognized as one of the world’s biodiversity hotspots, owing to its remarkable species richness and endemism. Several hypotheses on biotic and abiotic drivers of species diversification in the region have been often proposed but rarely tested in an explicit phylogenetic framework. Here, we investigate the impact of bo...


An expanded molecular phylogeny of Plumbaginaceae, with emphasis on Limonium (s...

Koutroumpa, Konstantina; Theodoridis, Spyros; Warren, Ben H.; Jiménez, Ares; Celep, Ferhat; Doğan, Musa; Romeiras, Maria M.; Santos-Guerra, Arnoldo

Plumbaginaceae is characterized by a history of multiple taxonomic rearrangements and lacks a broad molecular phylogenetic framework. Limonium is the most species‐ rich genus of the family with ca. 600 species and cosmopolitan distribution. Its center of diversity is the Mediterranean region, where ca. 70% of all Limonium species are endemic. In this study, we sample 201 Limonium species covering all described ...


An expanded molecular phylogeny of Plumbaginaceae, with emphasis on Limonium (s...

Koutroumpa, Konstantina; Theodoridis, Spyros; Warren, Ben H.; Jiménez, Ares; Celep, Ferhat; Dogan, Musa; Romeiras, Maria; Santos-Guerra, Arnoldo

Plumbaginaceae is characterized by a history of multiple taxonomic rearrangements and lacks a broad molecular phylogenetic framework. Limonium is the most speciesrich genus of the family with ca. 600 species and cosmopolitan distribution. Its center of diversity is the Mediterranean region, where ca. 70% of all Limonium species are endemic. In this study, we sample 201 Limonium species covering all described in...


An expanded molecular phylogeny of Plumbaginaceae, with emphasis on Limonium (s...

Koutroumpa, Konstantina; Theodoridis, Spyros; Warren, Ben H.; Jiménez, Ares; Celep, Ferhat; Doğan, Musa; Romeiras, Maria M.; Santos‐Guerra, Arnoldo

Plumbaginaceae is characterized by a history of multiple taxonomic rearrangements and lacks a broad molecular phylogenetic framework. Limonium is the most species-rich genus of the family with ca. 600 species and cosmopolitan distribution. Its center of diversity is the Mediterranean region, where ca. 70% of all Limonium species are endemic. In this study, we sample 201 Limonium species covering all described i...


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