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Ancient DNA at the edge of the world: Continental immigration and the persisten...

Dulias, Katharina; Foody, M George B; Justeau, Pierre; Silva, Marina; Martiniano, Rui; Oteo-García, Gonzalo; Fichera, Alessandro; Rodrigues, Simão

Orkney was a major cultural center during the Neolithic, 3800 to 2500 BC. Farming flourished, permanent stone settlements and chambered tombs were constructed, and long-range contacts were sustained. From ∼3200 BC, the number, density, and extravagance of settlements increased, and new ceremonial monuments and ceramic styles, possibly originating in Orkney, spread across Britain and Ireland. By ∼2800 BC, this p...


Biomolecular insights into North African-related ancestry, mobility and diet in...

Silva, Marina; Oteo-García, Gonzalo; Martiniano, Rui; Guimarães, João; von Tersch, Matthew; Madour, Ali; Shoeib, Tarek; Fichera, Alessandro

Historical records document medieval immigration from North Africa to Iberia to create Islamic al-Andalus. Here, we present a low-coverage genome of an eleventh century CE man buried in an Islamic necropolis in Segorbe, near Valencia, Spain. Uniparental lineages indicate North African ancestry, but at the autosomal level he displays a mosaic of North African and European-like ancestries, distinct from any prese...


Phylogeography of 27,000 SARS-CoV-2 genomes: Europe as the major source of the ...

Rito, Teresa S; Richards, Martin B.; Pala, Maria; Correia-Neves, M; Soares, Pedro

The novel coronavirus SARS-CoV-2 emerged from a zoonotic transmission in China towards the end of 2019, rapidly leading to a global pandemic on a scale not seen for a century. In order to cast fresh light on the spread of the virus and on the effectiveness of the containment measures adopted globally, we used 26,869 SARS-CoV-2 genomes to build a phylogeny with 20,247 mutation events and adopted a phylogeographi...


The genomic history of the Iberian Peninsula over the past 8000 years

Olalde, Iñigo; Mallick, Swapan; Patterson, Nick; Rohland, Nadin; Villalba-Mouco, Vanessa; Silva, Marina; Dulias, Katharina; Edwards, Ceiridwen J

We assembled genome-wide data from 271 ancient Iberians, of whom 176 are from the largely unsampled period after 2000 BCE, thereby providing a high-resolution time transect of the Iberian Peninsula. We document high genetic substructure between northwestern and southeastern hunter-gatherers before the spread of farming. We reveal sporadic contacts between Iberia and North Africa by ~2500 BCE and, by ~2000 BCE, ...


Maternal relationships within an Iron Age burial at the High Pasture Cave, Isle...

Dulias, Katharina; Birch, Steven; Wilson, James F.; Justeau, Pierre; Gandini, Francesca; Flaquer, Antònia; Soares, Pedro; Richards, Martin B.

Human remains from the Iron Age in Atlantic Scotland are rare, which makes the assemblage of an adult female and numerous foetal bones at High Pasture Cave, on the Isle of Skye, particularly noteworthy. Archaeological evidence suggests that the female had been deposited as an articulated skeleton when the cave entrance was blocked off, marking the end of use of the site. Particularly intriguing is the depositio...


On methodological issues in the Indo-European debate by Michel Danino

Silva, Marina; Koch, John T.; Pala, Maria; Edwards, Ceiridwen J.; Soares, Pedro; Richards, Martin B.

[Excerpt] The prehistories of the population and languages of India are scientific questions (Majumder 2018). Unlike questions decided in mathematics or a court of law, scientific questions cannot lead to definitive proof. Rather, new evidence and advances in methods will bring a succession of improved models that account better for wider ranges of more accurately documented evidence. There will always be doubt...


The genomic history of the Iberian Peninsula over the past 8000 years

Olalde, Iñigo; Mallick, Swapan; Patterson, Nick; Rohland, Nadin; Villalba-Mouco, Vanessa; Silva, Marina; Dulias, Katharina; Edwards, Ceiridwen J.

We assembled genome-wide data from 271 ancient Iberians, of whom 176 are from the largely unsampled period after 2000 BCE, thereby providing a high-resolution time transect of the Iberian Peninsula. We document high genetic substructure between northwestern and southeastern hunter-gatherers before the spread of farming. We reveal sporadic contacts between Iberia and North Africa by ~2500 BCE and, by ~2000 BCE, ...


Mitogenome diversity in Sardinians: a genetic window onto an island's past

Olivieri, Anna; Sidore, Carlo; Achilli, Alessandro; Angius, Andrea; Posth, Cosimo; Furtwängler, Anja; Brandini, Stefania; Capodiferro, Marco Rosario

Sardinians are "outliers" in the European genetic landscape and, according to paleogenomic nuclear data, the closest to early European Neolithic farmers. To learn more about their genetic ancestry, we analyzed 3,491 modern and 21 ancient mitogenomes from Sardinia. We observed that 78.4% of modern mitogenomes cluster into 89 haplogroups that most likely arose in situ. For each Sardinian-specific haplogroup (SSH)...


Reconciling evidence from ancient and contemporary genomes: a major source for ...

Pereira, Joana B.; Costa, Marta D.; Vieira, Daniel; Pala, Maria; Bamford, Lisa; Harich, Nourdin; Cherni, Lotfi; Alshamali, Farida; Hatina, Jiři

Important gaps remain in our understanding of the spread of farming into Europe, due partly to apparent contradictions between studies of contemporary genetic variation and ancient DNA. It seems clear that farming was introduced into central, northern, and eastern Europe from the south by pioneer colonization. It is often argued that these dispersals originated in the Near East, where the potential source genet...


A genetic chronology for the Indian Subcontinent points to heavily sex-biased d...

Silva, Marina; Oliveira, Marisa; Vieira, Daniel; Brandão, Andreia; Rito, Teresa S; Pereira, Joana B.; Fraser, Ross M.; Hudson, Bob; Gandini, Francesca

Background: India is a patchwork of tribal and non-tribal populations that speak many different languages from various language families. Indo-European, spoken across northern and central India, and also in Pakistan and Bangladesh, has been frequently connected to the so-called "Indo-Aryan invasions" from Central Asia similar to 3.5 ka and the establishment of the caste system, but the extent of immigration at ...


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