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Biogeography and global flows of 100 major alien fungal and fungus-like oomycet...

Schertler, Anna; Lenzner, Bernd; Dullinger, Stefan; Moser, Dietmar; Bufford, Jennifer L.; Ghelardini, Luisa; Santini, Alberto; Capinha, César

Aim: Spreading infectious diseases associated with introduced pathogens can have devastating effects on native biota and human livelihoods. We analyse the global distribution of 100 major alien fungal and oomycete pathogens with substantial socio-economic and environmental impacts and examine their taxonomy, ecological characteristics, temporal accumulation trajectories, regional hot- and coldspots of taxon ric...


Reform wildlife trade in the European Union

Cardoso, Pedro; Fukushima, Caroline S.; Maxhelaku, Armela; Poczai, Peter; Porto, Miguel; Puksas, Andrius; Reino, Luís; Saar, Indrek; Stringham, Oliver


Predicting the expansion of invasive species: how much data do we need?

Santana, Joana; Sillero, Neftalí; Ribeiro, Joana; Capinha, César; Lopes, Ricardo Jorge; Reino, Luís

Ecological niche models (ENMs) are a powerful tool to predict the spread of invasive alien species (IAS) and support the implementation of actions aiming to reduce the impact of biological invasions. While calibrating ENMs with distribution data from species’ native ranges can underestimate the invasion potential due to possible niche shifts, using distribution data combining species’ native and invasive ranges...


Predicting the expansion of invasive species: how much data do we need?

Santana, Joana; Sillero, Neftalí; Ribeiro, Joana; Capinha, César; Lopes, Ricardo Jorge; Reino, Luís

Ecological niche models (ENMs) are a powerful tool to predict the spread of invasive alien species (IAS) and support the implementation of actions aiming to reduce the impact of biological invasions. While calibrating ENMs with distribution data from species’ native ranges can underestimate the invasion potential due to possible niche shifts, using distribution data combining species’ native and invasive ranges...


Biogeography and global flows of 100 major alien fungal and fungus‐like oomycet...

Schertler, Anna; Lenzner, Bernd; Dullinger, Stefan; Moser, Dietmar; Bufford, Jennifer L.; Ghelardini, Luisa; Santini, Alberto; Capinha, César

Aim: Spreading infectious diseases associated with introduced pathogens can have devastating effects on native biota and human livelihoods. We analyse the global distribution of 100 major alien fungal and oomycete pathogens with substantial socio-economic and environmental impacts and examine their taxonomy, ecological characteristics, temporal accumulation trajectories, regional hot- and coldspots of taxon ric...


Large language models overcome the challenges of unstructured text data in ecology

Castro, Andry; Pinto, João; Reino, Luís; Pipek, Pavel; Capinha, César

The vast volume of currently available unstructured text data, such as research papers, news, and technical report data, shows great potential for ecological research. However, manual processing of such data is labour-intensive, posing a significant challenge. In this study, we aimed to assess the application of three state-of-the-art prompt-based large language models (LLMs), GPT-3.5, GPT-4, and LLaMA-2-70B, t...


Grassland vegetation height affects bird responses to forest edges in Mediterra...

Faria, João; Reino, Luís; Beja, Pedro; Gonçalves, David; Sánchez-Oliver, Juan S.; Moreira, Francisco; Catry, Inês; Rotenberry, John T.; Morgado, Rui

Afforestation affects Mediterranean farmland biodiversity due to loss and fragmentation of grassland habitats. While the influence of landscape context and plantation edges on farmland bird responses to afforestation is well-documented, less is known about the influence of grassland vegetation height and how it interacts with afforestation to influence bird communities. Here, we examined how changes in grasslan...


Who is reporting non-native species and how? A cross-expert assessment of pract...

Castro, Andry; Ribeiro, Joana; Reino, Luís; Capinha, César

Each year, hundreds of scientific works with species' geographical data are published. However, these data can be challenging to identify, collect, and integrate into analytical workflows due to differences in reporting structures, storage formats, and the omission or inconsistency of relevant information and terminology. These difficulties tend to be aggravated for non-native species, given varying attitudes t...


Negative and positive impacts of alien macrofungi: a global scale database

Monteiro, Miguel; Capinha, César; Ferreira, Maria Teresa; Nuñez, Martin A.; Reino, Luís

Advances in ecological research during the last decades have led to an improved understanding of the impacts of alien species. Despite that, the effects of alien macrofungi have often received little attention and are still poorly understood. With the aim of reducing this knowledge gap, we compiled a database of the recorded socio-economic and environmental impacts of alien macrofungi. This database was compile...


Who is reporting non‐native species and how? A cross‐expert assessment of pract...

Castro, Andry; Ribeiro, Joana; Reino, Luís; Capinha, César

Each year, hundreds of scientific works with species' geographical data are published. However, these data can be challenging to identify, collect, and integrate into analytical workflows due to differences in reporting structures, storage formats, and the omission or inconsistency of relevant information and terminology. These difficulties tend to be aggravated for non-native species, given varying attitudes t...


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