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Diverse prehistoric cattle husbandry strategies in the forests of Central Europe.

Gillis, Rosalind; Kendall, Iain P; Roffet-Salque, Mélanie; Zanon, Marco; Anders, Alexandra; Arbogast, Rose-Marie; Bogucki, Peter; Brychova, Veronika

During the sixth millennium bce, the first farmers of Central Europe rapidly expanded across a varied mosaic of forested environments. Such environments would have offered important sources of mineral-rich animal feed and shelter, prompting the question: to what extent did early farmers exploit forests to raise their herds? Here, to resolve this, we have assembled multi-regional datasets, comprising bulk and co...


Dairying, diseases and the evolution of lactase persistence in Europe

Evershed, Richard P.; Davey Smith, George; Roffet-Salque, Mélanie; Timpson, Adrian; Diekmann, Yoan; Lyon, Matthew S.; Cramp, Lucy J. E.

In European and many African, Middle Eastern and southern Asian populations, lactase persistence (LP) is the most strongly selected monogenic trait to have evolved over the past 10,000 years(1). Although the selection of LP and the consumption of prehistoric milk must be linked, considerable uncertainty remains concerning their spatiotemporal configuration and specific interactions(2,3). Here we provide detaile...


OrtSuite: from genomes to prediction of microbial interactions within targeted ...

Saraiva, João Pedro; Bartholomäus, Alexandre; Kallies, René; Gomes, Marta; Bicalho, Marcos; Kasmanas, Jonas Coelho; Vogt, Carsten; Chatzinotas, Antonis

The high complexity found in microbial communities makes the identification of microbial interactions challenging. To address this challenge, we present OrtSuite, a flexible workflow to predict putative microbial interactions based on genomic content of microbial communities and targeted to specific ecosystem processes. The pipeline is composed of three user-friendly bash commands. OrtSuite combines ortholog cl...


Widespread exploitation of the honeybee by early Neolithic farmers

Roffet-Salque, Mélanie; Regert, Martine; Evershed, Richard P.; Outram, Alan K.; Cramp, Lucy J. E.; Decavallas, Orestes; Dunne, Julie; Gerbault, Pascale

The pressures on honeybee (Apis mellifera) populations, resulting from threats by modern pesticides, parasites, predators and diseases, have raised awareness of the economic importance and critical role this insect plays in agricultural societies across the globe. However, the association of humans with A. mellifera predates post-industrial-revolution agriculture, as evidenced by the widespread presence of anci...


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