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Drosophila Evolution over Space and Time (DEST): A New Population Genomics Reso...

Kapun, M; Nunez, JCB; Bogaerts-Márquez, M; Murga-Moreno, J; Paris, M; Outten, J; Coronado-Zamora, M; Tern, C; Rota-Stabelli, O; García Guerreiro, MP

Drosophila melanogaster is a leading model in population genetics and genomics, and a growing number of whole-genome data sets from natural populations of this species have been published over the last years. A major challenge is the integration of disparate data sets, often generated using different sequencing technologies and bioinformatic pipelines, which hampers our ability to address questions about the ev...


Looking Ahead: Health Impact Assessment of Front-of-Pack Nutrition Labelling Sc...

Feteira Santos, R; Alarcao, V; Santos, O; Virgolino, A; Fernandes, J; Vieira, CP; Gregório, Maria João; Nogueira, P; Costa, A; Graça, Pedro

This study aimed to describe the underlying process, used methods and major recommendations emerging from a comprehensive and prospective health impact assessment of the endorsement of a front-of-pack nutrition labelling (FOP-NL) system by the Portuguese health authorities. A mixed-methods approach was used to gather information on the impact of four FOP-NL schemes on consumers' selection of food products accor...


The discovery, distribution, and diversity of DNA viruses associated with Droso...

Wallace, MA; Coffman, KA; Gilbert, C; Ravindran, S; Albery, GF; Abbott, J; Argyridou, E; Bellosta, P; Betancourt, AJ; Colinet, H; Eric, K

Drosophila melanogaster is an important model for antiviral immunity in arthropods, but very few DNA viruses have been described from the family Drosophilidae. This deficiency limits our opportunity to use natural host-pathogen combinations in experimental studies, and may bias our understanding of the Drosophila virome. Here, we report fourteen DNA viruses detected in a metagenomic analysis of 6668 pool-sequen...


The identification of the Rosa S-locus and implications on the evolution of the...

Vieira, J; Pimenta, J; Gomes, A; Laia, J; Rocha, S; Heitzler, P; Vieira, CP

In Rosaceae species, two gametophytic self-incompatibility (GSI) mechanisms are described, the Prunus self-recognition system and the Maleae (Malus/Pyrus/Sorbus) non-self- recognition system. In both systems the pistil component is a S-RNase gene, but from two distinct phylogenetic lineages. The pollen component, always a F-box gene(s), in the case of Prunus is a single gene, and in Maleae there are multiple ge...


Multiple loci linked to inversions are associated with eye size variation in sp...

Reis, M; Wiegleb, G; Claude, J; Lata, R; Horchler, B; Ha, NT; Reimer, C; Vieira, CP; Vieira, J; Posnien, N

The size and shape of organs is tightly controlled to achieve optimal function. Natural morphological variations often represent functional adaptations to an ever-changing environment. For instance, variation in head morphology is pervasive in insects and the underlying molecular basis is starting to be revealed in the Drosophila genus for species of the melanogaster group. However, it remains unclear whether s...


Impact of different front-of-pack nutrition labels on online food choices

Santos, O; Alarcao, V; Feteira Santos, R; Fernandes, J; Virgolino, A; Sena, C; Vieira, CP; Gregório, Maria João; Nogueira, P; Graça, Pedro; Costa, A

Front-of-pack nutrition labels (FOP-NL) are efficient tools for increasing consumers' awareness of the nutritional quality of food products, prompting healthier food choices. The main goal of this study was to evaluate the impact of four FOP-NL schemes - Traffic Light label (TL), Guideline Daily Amounts (%GDA), Nutri-Score (NS) and Health Star Rating (HSR) - on consumers' selection of food products according to...


Effectiveness of interpretive front-of-pack nutritional labelling schemes on th...

Feteira-Santos, R; Fernandes, J; Virgolino, A; Alarcão, V; Sena, C; Vieira, CP; Gregório, Maria João; Nogueira, P; Costa, A; Graça, Pedro; Santos, O


Mycobacterium tuberculosis associated with severe tuberculosis evades cytosolic...

Sousa, J; Cá, B; Maceiras, AR; Simões-Costa, L; Fonseca, KL; Fernandes, AI; Ramos, A; Carvalho, T; Barros, L; Magalhães, C; Chiner-Oms, Á; Machado, H

Genetic diversity of Mycobacterium tuberculosis affects immune responses and clinical outcomes of tuberculosis (TB). However, how bacterial diversity orchestrates immune responses to direct distinct TB severities is unknown. Here we study 681 patients with pulmonary TB and show that M. tuberculosis isolates from cases with mild disease consistently induce robust cytokine responses in macrophages across multiple...


Mycobacterium tuberculosis associated with severe tuberculosis evades cytosolic...

Sousa, J; Cá, B; Maceiras, AR; Simões-Costa, L; Fonseca, KL; Fernandes, AI; Ramos, A; Carvalho, T; Barros, L; Magalhães, C; Chiner-Oms, Á; Machado, H

Genetic diversity of Mycobacterium tuberculosis affects immune responses and clinical outcomes of tuberculosis (TB). However, how bacterial diversity orchestrates immune responses to direct distinct TB severities is unknown. Here we study 681 patients with pulmonary TB and show that M. tuberculosis isolates from cases with mild disease consistently induce robust cytokine responses in macrophages across multiple...


Multiple independent L-gulonolactone oxidase (GULO) gene losses and vitamin C s...

Henriques, SF; Duque, P; López-Fernández, H; Vázquez, N; Fdez-Riverola, F; Reboiro-Jato, M; Vieira, CP; Vieira, J

Background: L-ascorbate (Vitamin C) is an important antioxidant and co-factor in eukaryotic cells, and in mammals it is indispensable for brain development and cognitive function. Vertebrates usually become L-ascorbate auxothrophs when the last enzyme of the synthetic pathway, an L-gulonolactone oxidase (GULO), is lost. Since Protostomes were until recently thought not to have a GULO gene, they were considered ...


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