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Integrated analyses of the transmission history of SARS-CoV-2 and its associati...
Cella, Eleonora; Fonseca, Vagner; Branda, Francesco; Tosta, Stephane; Moreno, Keldenn; Schuab, Gabriel; Ali, Sobur; Slavov, Svetoslav NanevBackground: Italy was significantly affected by the COVID-19 pandemic, experiencing multiple waves of infection following the sequential emergence of new variants. Understanding the transmission patterns and evolution of SARS-CoV-2 is vital for future preparedness. Methods: We conducted an analysis of viral genome sequences, integrating epidemiological and phylodynamic approaches, to characterize how SARS-CoV-2...
Replacement of the Gamma by the Delta variant in Brazil: Impact of lineage disp...
Giovanetti, Marta; Fonseca, Vagner; Wilkinson, Eduan; Tegally, Houriiyah; San, Emmanuel James; Althaus, Christian L.; Xavier, JoilsonMade available in DSpace on 2022-04-28T17:21:53Z (GMT). No. of bitstreams: 0 Previous issue date: 2022-04-01; National Institutes of Health USA; CRP-ICGEB RESEARCH GRANT 2020 Project; Oswaldo Cruz Foundation; Brazilian Ministry of Health; Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq); Fundação de Amparo à Pesquisa do Estado do Rio de Janeiro (FAPERJ); European Union's Horizon 2020 researc...
Urgent need for a non-discriminatory and non-stigmatizing nomenclature for monk...
Happi, Christian; Adetifa, Ifedayo; Mbala, Placide; Njouom, Richard; Nakoune, Emmanuel; Happi, Anise; Ndodo, Nnaemeka; Ayansola, OyeronkeWe propose a novel, non-discriminatory classification of monkeypox virus diversity. Together with the World Health Organization, we named three clades (I, IIa and IIb) in order of detection. Within IIb, the cause of the current global outbreak, we identified multiple lineages (A.1, A.2, A.1.1 and B.1) to support real-time genomic surveillance.