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Draft genome sequence of Burkholderia gladioli Coa14, a bacterium with petroleu...
Lopes, Eraldo Ferreira; Da Costa, Josemar Gurgel; Wolf, Ivan Rodrigo [UNESP]; Lima, José Paulo de Araújo; Astolfi-Filho, SpartacoMade available in DSpace on 2022-04-28T19:08:52Z (GMT). No. of bitstreams: 0 Previous issue date: 2018-04-01; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES); Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq); Fundação de Amparo à Pesquisa do Estado do Amazonas; Burkholderia gladioli Coa14 is a bacterium isolated from water collected from Coari Lake (Amazonas, Brazil) that...
Three topological features of regulatory networks control life-essential and sp...
Wolf, Ivan Rodrigo [UNESP]; Simões, Rafael Plana [UNESP]; Valente, Guilherme Targino [UNESP]Made available in DSpace on 2022-04-28T19:48:30Z (GMT). No. of bitstreams: 0 Previous issue date: 2021-12-01; Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP); Gene regulatory networks (GRNs) play key roles in development, phenotype plasticity, and evolution. Although graph theory has been used to explore GRNs, associations amongst topological features, transcription factors (TFs), and systems esse...
A new method for next-generation sequencing of the full hepatitis b virus genom...
Hebeler-Barbosa, Flavia [UNESP]; Wolf, Ivan Rodrigo [UNESP]; Valente, Guilherme Targino [UNESP]; Mello, Francisco Campello Do Amaral; Lampe, ElisabethMade available in DSpace on 2021-06-25T10:11:30Z (GMT). No. of bitstreams: 0 Previous issue date: 2020-09-01; Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP); Hepatitis B virus (HBV) is an enveloped virus that induces chronic liver disease. HBV has been classified into eight genotypes (A–H) according to its genome sequence by using Sanger sequencing or reverse hybridization. Sanger sequencing is o...
Differential expression of miRNAs in the presence of B chromosome in the cichli...
Nascimento-Oliveira, Jordana Inácio [UNESP]; Fantinatti, Bruno Evaristo Almeida; Wolf, Ivan Rodrigo [UNESP]; Cardoso, Adauto Lima [UNESP]Made available in DSpace on 2021-06-25T11:00:01Z (GMT). No. of bitstreams: 0 Previous issue date: 2021-12-01; Background: B chromosomes (Bs) are extra elements observed in diverse eukaryotes, including animals, plants and fungi. Although Bs were first identified a century ago and have been studied in hundreds of species, their biology is still enigmatic. Recent advances in omics and big data technologies are re...
Uncovering patterns of the evolution of genomic sequence entropy and complexity
Simões, Rafael Plana [UNESP]; Wolf, Ivan Rodrigo [UNESP]; Correa, Bruno Afonso [UNESP]; Valente, Guilherme Targino [UNESP]Made available in DSpace on 2021-06-25T10:17:17Z (GMT). No. of bitstreams: 0 Previous issue date: 2021-03-01; The lack of consensus concerning the biological meaning of entropy and complexity of genomes and the different ways to assess these data hamper conclusions concerning what are the causes of genomic entropy variation among species. This study aims to evaluate the entropy and complexity of genomic sequenc...
Transcriptional analysis of THP-1 cells infected with leishmania infantum indic...
Gatto, Mariana [UNESP]; Borim, Patrícia Aparecida [UNESP]; Wolf, Ivan Rodrigo [UNESP]; da Cruz, Taís Fukuta [UNESP]Made available in DSpace on 2020-12-12T01:55:37Z (GMT). No. of bitstreams: 0 Previous issue date: 2020-01-01; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES); Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP); Leishmaniasis is caused by intracellular parasites transmitted to vertebrates by sandfly bites. Clinical manifestations include cutaneous, mucosal or visceral involvement d...
Genome-wide identification of multifunctional laccase gene family in Eucalyptus...
Arcuri, Mariana L. C. [UNESP]; Fialho, Larissa C. [UNESP]; Vasconcellos Nunes-Laitz, Alessandra [UNESP]; Fuchs-Ferraz, Maria Cecília P. [UNESP]Made available in DSpace on 2020-12-12T01:57:18Z (GMT). No. of bitstreams: 0 Previous issue date: 2020-06-01; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES); Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq); Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP); Key message: A survey of theEucalyptus grandis genome revealed the presence of 54 laccase genes. Their...
A novel molecular mechanism to explain mutations of the HCV protease associated...
Nazario de Moraes, Leonardo [UNESP]; Tommasini Grotto, Rejane Maria [UNESP]; Targino Valente, Guilherme [UNESP]; de Carvalho Sampaio, Heloisa [UNESP]Made available in DSpace on 2020-12-12T00:56:54Z (GMT). No. of bitstreams: 0 Previous issue date: 2019-12-01; NS3 is an important therapeutic target for direct-acting antiviral (DAA) drugs. However, many patients treated with DAAs have unsustained virologic response (UVR) due to the high mutation rate of HCV. The aim of this work was to shed some light on the puzzling molecular mechanisms of the virus's of pati...
Transcriptional profile of a bioethanol production contaminant Candida tropicalis
Lourencetti, Natália Manuela Strohmayer [UNESP]; Wolf, Ivan Rodrigo [UNESP]; Lacerda, Maria Priscila Franco [UNESP]; Valente, Guilherme Targino [UNESP]Made available in DSpace on 2019-10-06T16:52:25Z (GMT). No. of bitstreams: 0 Previous issue date: 2018-12-01; Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq); The fermentation process is widely used in the industry for bioethanol production. Even though it is widely used, microbial contamination is unpredictable and difficult to control. The problem of reduced productivity is directly linke...
Draft Genome Sequence of Burkholderia gladioli Coa14, a Bacterium with Petroleu...
Lopes, Eraldo Ferreira; Da Costa, Josemar Gurgel; Wolf, Ivan Rodrigo [UNESP]; Araujo Lima, Jose Paulo de; Astolfi-Filho, SpartacoMade available in DSpace on 2019-10-04T18:35:17Z (GMT). No. of bitstreams: 0 Previous issue date: 2018-04-01; FAPEAM; Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq); Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES); Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP); Burkholderia gladioli Coa14 is a bacterium isolated from water collected from Coari Lake (Amaz...