Document details

In silico identification and characterization of novel microsatellite loci for the Blue-and-yellow Macaw Ara ararauna (Linnaeus, 1758) (Psittaciformes, Psittacidae)

Author(s): Lima-Rezende, Cássia Alves ; Fernandes, Gislaine Aparecida ; Silva, Helder Elias da ; Dobkowski-Marinho, Sarah ; Santos, Victor Fernandes ; Rodrigues, Fernando Pacheco ; Caparroz, Renato

Date: 2020

Origin: Oasisbr

Subject(s): Animais selvagens em cativeiro; Tráfico de animais; Parentesco; Papagaio (Ave); Vida selvagem - conservação; Animais selvagens em cativeiro; Animais selvagens em cativeiro; Tráfico de animais; Tráfico de animais; Parentesco; Parentesco; Papagaio (Ave); Papagaio (Ave); Vida selvagem - conservação; Vida selvagem - conservação


Description

The illegal trade is a major threat to many bird species, and parrots are common victims of this activity. Domestic and international pet markets are interested on different parrot species, such as the Blue-and-yellow Macaw (Ara ararauna). This South American macaw is not globally threatened, but is under protection from over-exploitation. This study aimed to identify and characterize novel microsatellite loci for population and parentage analysis of A. ararauna. Scaffold sequences of Ara macao available in the NCBI database were used for microsatellite searches using MsatCommander software. We tested a total of 28 loci, from which 25 were polymorphic, one was monomorphic, and two did not generated amplification products. For polymorphic loci, the mean number of alleles was 8.24 (4 – 15 alleles per locus), the observed heterozygosity ranged from 0.333 to 0.917, and the expected heterozygosity from 0.353 to 0.890. The paternity exclusion probability and identity probability were highly discriminatory. Thus, these novel microsatellite markers can be useful for population assignment and paternity tests, helping the authorities to manage macaws from the illegal trafficking and control commercial breeders.

Document Type Journal article
Language English
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