Document details

Comparative RNA-Seq analysis of S. epidermidis underSEP1 phage infection during exponential and stationary growth

Author(s): Silva, Maria Daniela ; Pinto, Graça ; França, Angela ; Azeredo, Joana ; Melo, Luís Daniel Rodrigues

Date: 2024

Persistent ID: https://hdl.handle.net/1822/92465

Origin: RepositóriUM - Universidade do Minho

Project/scholarship: info:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDB%2F04469%2F2020/PT; info:eu-repo/grantAgreement/FCT/3599-PPCDT/PTDC%2FBIA-MIC%2F2312%2F2020/PT;


Description

Bacteria in nature often exist in the stationary phase, where antimicrobials, including phages, are less effective. The SEP1 phage was shown to reduce stationary S. epidermidis cells. This study analysed the response of both exponential and stationary cells to SEP1 infection. For that, RNA was extracted at 0, 5, 15, and 30 min post-infection and analysed by RNA-seq. In exponential cells, only 3 genes were upregulated at 5 min. In stationary cells, 29 genes were upregulated at 5 min, increasing to 894 at 15 min. Many genes related to translation and RNA metabolic processes were highly expressed in stationary cells, showing that SEP1 hijacks host transcription.

This study was supported by FCT under the scope of the strategic funding of UIDB/04469/2020 unit and project PTDC/BIA-MIC/2312/2020, and by LABBELS, LA/P/0029/2020. AF acknowledges funding from FCT through DL57/2016/CP1377/CT0032 and LDRM through 2021.00221.CEECIND.

info:eu-repo/semantics/publishedVersion

Document Type Conference poster
Language English
Contributor(s) Universidade do Minho
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