Publicação
Automatic tracking and deformation measurements of red blood cells flowing through a microchannel with a microstenosis: the keyhole model
| Resumo: | This study aimed to assess the motion and its deformation index (DI) of red blood cells (RBCs) flowing through a microchannel with a microstenosis using an image analysis-based method. For this purpose, a microchannel having a smooth contraction was used and the images were captured by a standard high-speed microscopy system. An automatic image-processing and analysing method was developed in a MATLAB environment to not only track the motion of RBCs but also measure the DI along the microchannel. The keyhole model, tested in this study, proved to be a promising technique to automatically track individual RBCs in microchannels. |
|---|---|
| Autores principais: | Taboada, Bruna Rafaela Pereira |
| Outros Autores: | Monteiro, Fernando C.; Lima, Rui A. |
| Assunto: | Automatic tracking Deformation index Keyhole model Microfluids Red blood cells |
| Ano: | 2016 |
| País: | Portugal |
| Tipo de documento: | artigo |
| Tipo de acesso: | acesso aberto |
| Instituição associada: | Instituto Politécnico de Bragança |
| Idioma: | inglês |
| Origem: | Biblioteca Digital do IPB |
| _version_ | 1863851247374696448 |
|---|---|
| author | Taboada, Bruna Rafaela Pereira |
| author2 | Monteiro, Fernando C. Lima, Rui A. |
| author2_role | author author |
| author_facet | Taboada, Bruna Rafaela Pereira Monteiro, Fernando C. Lima, Rui A. |
| author_role | author |
| contributor_name_str_mv | Biblioteca Digital do IPB |
| country_str | PT |
| creators_json_str | [{\"Person.name\":\"Taboada, Bruna Rafaela Pereira\"},{\"Person.name\":\"Monteiro, Fernando C.\",\"Person.identifier.orcid\":\"0000-0002-1421-8006\"},{\"Person.name\":\"Lima, Rui A.\",\"Person.identifier.orcid\":\"0000-0003-3428-637X\"}] |
| datacite.contributors.contributor.contributorName.fl_str_mv | Biblioteca Digital do IPB |
| datacite.creators.creator.creatorName.fl_str_mv | Taboada, Bruna Rafaela Pereira Monteiro, Fernando C. Lima, Rui A. |
| datacite.date.Accepted.fl_str_mv | 2016-01-01T00:00:00Z |
| datacite.date.available.fl_str_mv | 2018-04-06T10:41:50Z |
| datacite.date.embargoed.fl_str_mv | 2018-04-06T10:41:50Z |
| datacite.rights.fl_str_mv | http://purl.org/coar/access_right/c_abf2 |
| datacite.subjects.subject.fl_str_mv | Automatic tracking Deformation index Keyhole model Microfluids Red blood cells |
| datacite.titles.title.fl_str_mv | Automatic tracking and deformation measurements of red blood cells flowing through a microchannel with a microstenosis: the keyhole model |
| dc.contributor.none.fl_str_mv | Biblioteca Digital do IPB |
| dc.creator.none.fl_str_mv | Taboada, Bruna Rafaela Pereira Monteiro, Fernando C. Lima, Rui A. |
| dc.date.Accepted.fl_str_mv | 2016-01-01T00:00:00Z |
| dc.date.available.fl_str_mv | 2018-04-06T10:41:50Z |
| dc.date.embargoed.fl_str_mv | 2018-04-06T10:41:50Z |
| dc.format.none.fl_str_mv | application/pdf |
| dc.identifier.none.fl_str_mv | http://hdl.handle.net/10198/16722 |
| dc.language.none.fl_str_mv | eng |
| dc.publisher.none.fl_str_mv | Taylor & Francis Group |
| dc.rights.cclincense.fl_str_mv | http://creativecommons.org/licenses/by/4.0/ |
| dc.rights.none.fl_str_mv | http://purl.org/coar/access_right/c_abf2 |
| dc.subject.none.fl_str_mv | Automatic tracking Deformation index Keyhole model Microfluids Red blood cells |
| dc.title.fl_str_mv | Automatic tracking and deformation measurements of red blood cells flowing through a microchannel with a microstenosis: the keyhole model |
| dc.type.none.fl_str_mv | http://purl.org/coar/resource_type/c_6501 |
| description | This study aimed to assess the motion and its deformation index (DI) of red blood cells (RBCs) flowing through a microchannel with a microstenosis using an image analysis-based method. For this purpose, a microchannel having a smooth contraction was used and the images were captured by a standard high-speed microscopy system. An automatic image-processing and analysing method was developed in a MATLAB environment to not only track the motion of RBCs but also measure the DI along the microchannel. The keyhole model, tested in this study, proved to be a promising technique to automatically track individual RBCs in microchannels. |
| dirty | 0 |
| eu_rights_str_mv | openAccess |
| format | article |
| fulltext.url.fl_str_mv | https://bibliotecadigital.ipb.pt/bitstreams/5e8c1910-9a2f-4ec2-b24f-4b5f25e47e27/download |
| id | ipb_3ffac70c0dc0c657eb700eaecf45642d |
| identifier.url.fl_str_mv | http://hdl.handle.net/10198/16722 |
| instacron_str | ipb |
| institution | Instituto Politécnico de Bragança |
| instname_str | Instituto Politécnico de Bragança |
| language | eng |
| network_acronym_str | ipb |
| network_name_str | Biblioteca Digital do IPB |
| oai_identifier_str | oai:bibliotecadigital.ipb.pt:10198/16722 |
| organization_str_mv | urn:organizationAcronym:ipb |
| person_str_mv | Taboada, Bruna Rafaela Pereira Monteiro, Fernando C. Monteiro, Fernando C. https://www.ciencia-id.pt/2019-BDBF-10E2 2019-BDBF-10E2 http://orcid.org/0000-0002-1421-8006 0000-0002-1421-8006 Lima, Rui A. Lima, Rui A. https://www.ciencia-id.pt/EE12-C3FB-349D EE12-C3FB-349D http://orcid.org/0000-0003-3428-637X 0000-0003-3428-637X |
| publishDate | 2016 |
| publisher.none.fl_str_mv | Taylor & Francis Group |
| reponame_str | Biblioteca Digital do IPB |
| repository_id_str | urn:repositoryAcronym:ipb |
| service_str_mv | urn:repositoryAcronym:ipb |
| spelling | engTaylor & Francis Grouppt_PTThis study aimed to assess the motion and its deformation index (DI) of red blood cells (RBCs) flowing through a microchannel with a microstenosis using an image analysis-based method. For this purpose, a microchannel having a smooth contraction was used and the images were captured by a standard high-speed microscopy system. An automatic image-processing and analysing method was developed in a MATLAB environment to not only track the motion of RBCs but also measure the DI along the microchannel. The keyhole model, tested in this study, proved to be a promising technique to automatically track individual RBCs in microchannels.application/pdfpt_PTAutomatic tracking and deformation measurements of red blood cells flowing through a microchannel with a microstenosis: the keyhole modelTaboada, Bruna Rafaela PereiraPersonalMonteiro, Fernando C.DSpacehttp://dspace.org/items/363b6c37-282c-4cd6-bb54-3c97cc700d78DSpacehttp://dspace.org/items/363b6c37-282c-4cd6-bb54-3c97cc700d78MonteiroFernando C.Ciência IDhttps://www.ciencia-id.pt2019-BDBF-10E2ORCIDhttp://orcid.org0000-0002-1421-8006Researcher IDhttps://www.researcherid.comH-9213-2016Scopus Author IDhttps://www.scopus.com8986162600PersonalLima, Rui A.DSpacehttp://dspace.org/items/7b50c499-8095-4f4f-8b1b-fa7388e4ff62DSpacehttp://dspace.org/items/7b50c499-8095-4f4f-8b1b-fa7388e4ff62LimaRui A.Ciência IDhttps://www.ciencia-id.ptEE12-C3FB-349DORCIDhttp://orcid.org0000-0003-3428-637XResearcher IDhttps://www.researcherid.comH-5157-2016Scopus Author IDhttps://www.scopus.com18437397800HostingInstitutionOrganizationalBiblioteca Digital do IPBe-mailmailto:dspace@ipb.ptdspace@ipb.ptISSNIsPartOf2168-1163DOIIsPartOf10.1080/21681163.2014.9578682018-04-06T10:41:50Z20162016-01-01T00:00:00ZHandlehttp://hdl.handle.net/10198/16722http://purl.org/coar/access_right/c_abf2open accessAutomatic trackingDeformation indexKeyhole modelMicrofluidsRed blood cells523922 bytesliteraturehttp://purl.org/coar/resource_type/c_6501journal article2016http://creativecommons.org/licenses/by/4.0/http://purl.org/coar/access_right/c_abf2application/pdffulltexthttps://bibliotecadigital.ipb.pt/bitstreams/5e8c1910-9a2f-4ec2-b24f-4b5f25e47e27/downloadComputer Methods in Biomechanics and Biomedical Engineering: Imaging and Visualization43-4229237 |
| spellingShingle | Automatic tracking and deformation measurements of red blood cells flowing through a microchannel with a microstenosis: the keyhole model Taboada, Bruna Rafaela Pereira Automatic tracking Deformation index Keyhole model Microfluids Red blood cells |
| subject.fl_str_mv | Automatic tracking Deformation index Keyhole model Microfluids Red blood cells |
| title | Automatic tracking and deformation measurements of red blood cells flowing through a microchannel with a microstenosis: the keyhole model |
| title_full | Automatic tracking and deformation measurements of red blood cells flowing through a microchannel with a microstenosis: the keyhole model |
| title_fullStr | Automatic tracking and deformation measurements of red blood cells flowing through a microchannel with a microstenosis: the keyhole model |
| title_full_unstemmed | Automatic tracking and deformation measurements of red blood cells flowing through a microchannel with a microstenosis: the keyhole model |
| title_short | Automatic tracking and deformation measurements of red blood cells flowing through a microchannel with a microstenosis: the keyhole model |
| title_sort | Automatic tracking and deformation measurements of red blood cells flowing through a microchannel with a microstenosis: the keyhole model |
| topic | Automatic tracking Deformation index Keyhole model Microfluids Red blood cells |
| topic_facet | Automatic tracking Deformation index Keyhole model Microfluids Red blood cells |
| url | http://hdl.handle.net/10198/16722 |
| visible | 1 |