Publicação
Insight into the sulfur metabolism of Desulfurella amilsii by differential proteomics
| Resumo: | Many questions regarding proteins involved in microbial sulfur metabolism remain unsolved. For sulfur respiration at low pH, the terminal electron acceptor is still unclear. Desulfurella amilsii is a sulfur-reducing bacterium that respires elemental sulfur (S0) or thiosulfate, and grows by S0 disproportionation. Due to its versatility, comparative studies on D. amilsii may shed light on microbial sulfur metabolism. Requirement of physical contact between cells and S0 was analyzed. Sulfide production decreased by around 50\% when S0 was trapped in dialysis membranes, suggesting that contact between cells and S0 is beneficial, but not strictly needed. Proteome analysis was performed under the aforementioned conditions. A Mo-oxidoreductase suggested from genome analysis to act as sulfur reductase was not detected in any growth condition. Thiosulfate and sulfite reductases showed increased abundance in thiosulfate-reducing cultures, while rhodanese-like sulfurtransferases were highly abundant in all conditions. DsrE and DsrL were abundantly detected during thiosulfate reduction, suggesting a modified mechanism of sulfite reduction. Proteogenomics suggest a different disproportionation pathway from what has been reported. This work points to an important role of rhodaneses in sulfur processes and these proteins should be considered in searches for sulfur metabolism in broader fields like meta-omics. |
|---|---|
| Autores principais: | Florentino, Anna P. |
| Outros Autores: | Pereira, Inês A. C.; Boeren, Sjef; Born, Michael; Stams, Alfons Johannes Maria; Sánchez-Andrea, Irene |
| Assunto: | Engenharia e Tecnologia::Biotecnologia Industrial |
| Ano: | 2019 |
| País: | Portugal |
| Tipo de documento: | artigo |
| Tipo de acesso: | acesso aberto |
| Instituição associada: | Universidade do Minho |
| Idioma: | inglês |
| Origem: | RepositóriUM - Universidade do Minho |
Registos relacionados
article Desulfurella amilsii sp. nov., a novel acidotolerant sulfur-respiring bacterium isolated from acidic river sediments
por: Florentino, Anna P.
Publicado em: (2016)
por: Florentino, Anna P.
Publicado em: (2016)
article Genome sequence of Desulfurella amilsii strain TR1 and comparative genomics of Desulfurellaceae family
por: Florentino, Anna
Publicado em: (2017)
por: Florentino, Anna
Publicado em: (2017)
article Co-culture of a novel fermentative bacterium, Lucifera butyrica gen. nov. sp. nov., with the sulfur reducer Desulfurella amilsii for enhanced sulfidogenesis
por: Sánchez-Andrea, Irene
Publicado em: (2018)
por: Sánchez-Andrea, Irene
Publicado em: (2018)
article The bacterial sulfur cycle in expanding dysoxic and euxinic marine waters
por: van Vliet, Daan M.
Publicado em: (2021)
por: van Vliet, Daan M.
Publicado em: (2021)
category Genome-scale metabolic network of the central carbon metabolism of Enterococcus faecalis
por: Portela, Carla
Publicado em: (2010)
por: Portela, Carla
Publicado em: (2010)
school Reconstructing of the metabolic network of Lactobacillus rhamnosus
por: Mendes, João Pedro Bernardo
Publicado em: (2019)
por: Mendes, João Pedro Bernardo
Publicado em: (2019)
category A metabolic integrated yeast knowledgebase (MIYEASTK)
por: Santos, Sophia
Publicado em: (2016)
por: Santos, Sophia
Publicado em: (2016)
category Reconciling experimental data with in silico predictions in metabolic engineering applications
por: Rocha, I.
Publicado em: (2015)
por: Rocha, I.
Publicado em: (2015)
category Reconstruction of a genome-scale metabolic model for Actinobacillus succinogenes
por: Carneiro, S.
Publicado em: (2015)
por: Carneiro, S.
Publicado em: (2015)
category Isolation of adipose stem cells (ASCs) subpopulations with distinct differentiation potential
por: Rada, Tommaso
Publicado em: (2008)
por: Rada, Tommaso
Publicado em: (2008)
category Towards metabolic optimization of CHO cells: in silico improvement of culture medium
por: Hamdi, Anis
Publicado em: (2019)
por: Hamdi, Anis
Publicado em: (2019)
school Accelerating metabolic engineering tasks by the in silico development of yeast cell factories
por: Lopes, Hélder Moisés Gonçalves Pinheiro
Publicado em: (2018)
por: Lopes, Hélder Moisés Gonçalves Pinheiro
Publicado em: (2018)
category Novel sulfate- and sulfur-reducing bacteria from the Black Sea: metagenomics, enrichment and isolation
por: van Vliet, Daan M.
Publicado em: (2019)
por: van Vliet, Daan M.
Publicado em: (2019)
category Integrating kinetic and constraint-based models of metabolism
por: Machado, D.
Publicado em: (2015)
por: Machado, D.
Publicado em: (2015)
category Modelling allosteric regulation for prediction of flux control in the central carbon metabolism of E. coli
por: Machado, C. D.
Publicado em: (2015)
por: Machado, C. D.
Publicado em: (2015)
school Systems analysis of minimal metabolic networks In prokaryotes
por: Xavier, Joana Rute Calça
Publicado em: (2016)
por: Xavier, Joana Rute Calça
Publicado em: (2016)
category Automated pathway curation and improving metabolic model reconstruction based on phylogenetic analysis of pathway conservation
por: Edirisinghe, Janaka N.
Publicado em: (2017)
por: Edirisinghe, Janaka N.
Publicado em: (2017)
category Proteomics of Syntrophomonas zehnderi and Methanobacterium formicicum growing on long-chain fatty acids
por: Salvador, A. F.
Publicado em: (2015)
por: Salvador, A. F.
Publicado em: (2015)
school Insights into interspecies interactions, phenotypic profile and antimicrobial susceptibility in an artificial ventilator-associated pneumonia microbiome
por: Grainha, Tânia Raquel Rodrigues
Publicado em: (2016)
por: Grainha, Tânia Raquel Rodrigues
Publicado em: (2016)
category Selected extended papers of the 12th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB)
por: Florentino, Fdez-Riverola
Publicado em: (2019)
por: Florentino, Fdez-Riverola
Publicado em: (2019)
category Immobilization of biomolecules on chitosan surface for selective recruitment, controlled growth and differentiation of cells from mixed populations
por: Custódio, Catarina Almeida
Publicado em: (2008)
por: Custódio, Catarina Almeida
Publicado em: (2008)
category Nano/microparticle incorporated chitosan fibers as tissue engineering scaffolds
por: Yilgor, P.
Publicado em: (2008)
por: Yilgor, P.
Publicado em: (2008)
category Filamentous fungi occurrence in free water and biofilms from drinking water storage tanks
por: Silva, P. B. R.
Publicado em: (2015)
por: Silva, P. B. R.
Publicado em: (2015)
category Metabolic models reconstruction using genome scale information (merlin): assessment and validation
por: Dias, Oscar
Publicado em: (2015)
por: Dias, Oscar
Publicado em: (2015)
category Spintronic devices for biomedical applications
por: Freitas, P. P.
Publicado em: (2013)
por: Freitas, P. P.
Publicado em: (2013)
category Valorisation of marine peptones as alternative growth substrates for lactic acid bacteria
por: Henggeler, Joana C.
Publicado em: (2019)
por: Henggeler, Joana C.
Publicado em: (2019)
category Advances on the construction of the European Research Infrastructure MIRRI
por: Casaregola, Serge
Publicado em: (2018)
por: Casaregola, Serge
Publicado em: (2018)
category Bioenergy from wastewater in a microbially-charged redox flow cell
por: Santos, Márcia S. S.
Publicado em: (2018)
por: Santos, Márcia S. S.
Publicado em: (2018)
category Isolation and preliminary characterization of a new bacteriophage against Sphaerotilus natans
por: Ferreira, Rute Vanessa Novais
Publicado em: (2018)
por: Ferreira, Rute Vanessa Novais
Publicado em: (2018)
category Scale-up and other challenges of Bioelectrochemical Systems
por: Alves, M. M.
Publicado em: (2017)
por: Alves, M. M.
Publicado em: (2017)
category Optimization of chitosan-based composite and bi-layered scaffolds produced by particles aggregation for osteochondral tissue engineering: Influence of hydroxylapatite
por: Malafaya, P. B.
Publicado em: (2008)
por: Malafaya, P. B.
Publicado em: (2008)
category Development and characterization of osteogenic cell sheets in an in vivo model
por: Pirraco, R. P.
Publicado em: (2008)
por: Pirraco, R. P.
Publicado em: (2008)
category Surface functionalization of starch/polycaprolactone fiber meshes for bone guide regeneration
por: López-Pérez, P. M.
Publicado em: (2008)
por: López-Pérez, P. M.
Publicado em: (2008)
category Inferring optimal minimal medium on genome-scale metabolic models using evolutionary algorithms
por: Santos, Sophia Torres
Publicado em: (2019)
por: Santos, Sophia Torres
Publicado em: (2019)
category PROTOFILWW: insights in the ecology of activated-sludge systems
por: Nicolau, Ana
Publicado em: (2009)
por: Nicolau, Ana
Publicado em: (2009)
category Proteomic responses to nanoparticulate and ionic silver in freshwater microbes with different background
por: Barros, Diana Cláudia Martins Costa
Publicado em: (2018)
por: Barros, Diana Cláudia Martins Costa
Publicado em: (2018)
category On to the impact of low cost substrates for BNC production
por: Rodrigues, Ana Cristina
Publicado em: (2019)
por: Rodrigues, Ana Cristina
Publicado em: (2019)
category Optimization of bacterial nanocellulose fermentation using lignocellulosic residues and development of novel BNC-starch composites
por: Soares da Silva, F. A. G.
Publicado em: (2019)
por: Soares da Silva, F. A. G.
Publicado em: (2019)
category Acetobacterium sp. strain JM, a biotechnological platform organism for syngas conversion
por: Arantes, Ana Luísa
Publicado em: (2019)
por: Arantes, Ana Luísa
Publicado em: (2019)
category Minimum information guideline for spectrophotometric and fluorometric methods to assess biofilm formation in microplates
por: Allkja, J.
Publicado em: (2019)
por: Allkja, J.
Publicado em: (2019)
Registos relacionados
-
article Desulfurella amilsii sp. nov., a novel acidotolerant sulfur-respiring bacterium isolated from acidic river sediments
por: Florentino, Anna P.
Publicado em: (2016) -
article Genome sequence of Desulfurella amilsii strain TR1 and comparative genomics of Desulfurellaceae family
por: Florentino, Anna
Publicado em: (2017) -
article Co-culture of a novel fermentative bacterium, Lucifera butyrica gen. nov. sp. nov., with the sulfur reducer Desulfurella amilsii for enhanced sulfidogenesis
por: Sánchez-Andrea, Irene
Publicado em: (2018) -
article The bacterial sulfur cycle in expanding dysoxic and euxinic marine waters
por: van Vliet, Daan M.
Publicado em: (2021) -
category Genome-scale metabolic network of the central carbon metabolism of Enterococcus faecalis
por: Portela, Carla
Publicado em: (2010)